Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790702.1_cds_XP_016503132.1_1582
CDS Infomation

[gene=LOC107821216] [db_xref=GeneID:107821216] [protein=F-box/LRR-repeat protein 17-like isoform X2] [protein_id=XP_016503132.1] [location=complement(join(4927..4992,5138..5236,5749..5834,5943..6009,6084..6304,6401..6498,6933..7037,7164..7348,7455..7599,8683..8784,8946..9559))] [gbkey=CDS]
Sequence

ATGCAAATCCCCCATCCGCACCCCTCCACCCCCATCTCCGACGCCTTCGTCCACAAGCGC
GGCAAAAAACGCGGTAGCTACAACTGCGGCCGATGTGGGCAACCCAAGAAAGGCCACGTT
TGCCATATCTCTAAGGACCTTAATGATACTAATCCTACTGAAGTTCCTACTCCCCTGCCT
AGCGAATCCAAATCCTTTGTTCTCCCTTCTCCGCTCTCTGTTATTCGTCCTCAGCAACTT
CCGCCCCCGCCACATCAGCCACTTCCCCAGCTCCGGCGAGCGCTTTCTTTCGATGACGTC
GATGTCAGCGATGATGAGTCGCCTGGATCGGATGCTGATGACGTGGAATGTTTGGATCTG
GAAAATGAGTTGGATTTAGGTGGGTCCGGGAAGTTACCAGCGAGTGCTTTGTGGGAAGTG
CTTAAGAGATTGCCTCCATCAGCGCTGCTTTCTGCGGCGAAGGTGTGCAAGGGTTGGAGG
GATGTTTCTAGAAGGATCTGGAAGTCGGCTGAGGAGCTTCGACTTGGAGTTCCTCTGAAA
GCTCAGATTGGGCTTGTTGGATCGGTGTTGCAGAAGTGTCCTGGACTTGTTAAGCTTTCA
CTTAGAATGGAAAGTGATGTGGATGCAACAATGCTGGCCTGCATTGCATTTTCCTGCCCT
AATCTGGATTCAATGGAGATCCTTACTTCAGATACCTCAGTTAATCGGATCACAGGGGAT
GAATTAGGCCGTTTTGTTGCTGACAGAAGGTGCCTTACCAATCTCAAGATGGAAGGCTGT
TCAAATCTTGGGCCCTTTACTCTTTTTTCAACCAGCCTTTCCACTCTTTGCCTTTCGGAT
CTCTTTTGTCACTCCAAGATGGTCTTCAACTGCCCCAATTTAAAGGAGATTTCCCTGGAT
TTTTCTCGCCAAGAGAAGGATAGCACTGATCTTACTGCTATGGTAGATGGTCTTGGAAGG
AGCTGCCCAAGACTACAGAACATTCATGTTGCTTCTGTTCGGCTTACACATGCTGTTGTG
CTTGCTCTAACAGCAGCAAATTTAAGGGGATTACGAATGCTTTCCCTTGTACTAGGGTCA
GAAATAACTGATGCATCTGTTGCTGCTATTGCTTCGAGCTACTCAAGGCTTGAGTTACTT
GATTTGAGTGGGTCTAGTATTAGTGATAGTGGCATTGGGATGATATGCAATATATTTCCA
GAGACATTGTCTAAACTTCTCCTTGCTCTTTGTCCAAATATCAGTTCAAGTGGCATTCAA
TTTGCTGCAGCTCAGTTGCCTAATCTAGAGATAATGGACTGTGGAATGACTATATGTGAT
CCAGATTTAGACAGTCCAACAACTCAGGAAAACGATAATGGCGAGTTACAAAGAACACCG
ATTAGTAAATTACACCTTATATACCAGAAACTGATTATCAAACACAGCCGCTTAAAGAAA
CTCAGCTTATGGGGTTGCTCTGGCTTAGATGCATTGTATCTAAATTGCCCAGAACTTAAT
GATTTGAACCTGAACTCTTGTACAAACTTGAATCCAGAAAGATTGCTACTTCAATGCCCC
AATCTGGAAAGTGTGCATGCATCATGCTGTCAAGACACATTGGTTGAAACTCTTCAGAAT
CAGGTTTGTGGTGATTTTATGGCTGGAGACAATCACTTTCCATCCAAACGTCTTCCTGAT
GGCTCAAAAAGGATCAGAGTTCCTCATTTATTCAGCCCCCTGCCATTTGATGATGAGAAG
AGAAAGAGAAGGATTTCAAAGCAACGGGGTGAGGTGCTTGTTTATTAG

Peptide Sequence

PEP ID

XP_016503132.1
PEP Infomation

PREDICTED: F-box/LRR-repeat protein 17-like isoform X2 [Nicotiana tabacum]
Sequence

MQIPHPHPSTPISDAFVHKRGKKRGSYNCGRCGQPKKGHVCHISKDLNDTNPTEVPTPLP
SESKSFVLPSPLSVIRPQQLPPPPHQPLPQLRRALSFDDVDVSDDESPGSDADDVECLDL
ENELDLGGSGKLPASALWEVLKRLPPSALLSAAKVCKGWRDVSRRIWKSAEELRLGVPLK
AQIGLVGSVLQKCPGLVKLSLRMESDVDATMLACIAFSCPNLDSMEILTSDTSVNRITGD
ELGRFVADRRCLTNLKMEGCSNLGPFTLFSTSLSTLCLSDLFCHSKMVFNCPNLKEISLD
FSRQEKDSTDLTAMVDGLGRSCPRLQNIHVASVRLTHAVVLALTAANLRGLRMLSLVLGS
EITDASVAAIASSYSRLELLDLSGSSISDSGIGMICNIFPETLSKLLLALCPNISSSGIQ
FAAAQLPNLEIMDCGMTICDPDLDSPTTQENDNGELQRTPISKLHLIYQKLIIKHSRLKK
LSLWGCSGLDALYLNCPELNDLNLNSCTNLNPERLLLQCPNLESVHASCCQDTLVETLQN
QVCGDFMAGDNHFPSKRLPDGSKRIRVPHLFSPLPFDDEKRKRRISKQRGEVLVY

Transcript Sequence

Gene sequence data has not been registered.